| ncRNA ID | gra-miR8759 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr6:33149646-33149815 [-] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 140 - UGGUGGAAGUAUUGUGCCCGG - 160 |
| Stem-loop(if miRNA) |
- C A CC -- A UUUAGCCCC - AUCU UUGGUUCCAAGGAGAGCC AACCC UCAAUGGUGGA GUAUUGUGC GGGGUGUU UAUGCU GGU GG GUUUU U C ||||| ||||||||||| ||||||||| |||||||| |||||| ||| || ||||| | UUGGG AGUUGCCACCU CAUAACACG CCCCAUAG AUACGA CUA CC CGAGG G A C A C AA AG A ----CCACU G ---- GUUUGAGACCCUUGGGCA |
| Stem-loop sequence | AACCCCUCAAUGGUGGAAGUAUUGUGCCCGGGGUGUUUAUGCUAGGUUUUAGCCCCGGGUUUUAUCUUUUGGUUCCAAGGAGAGCCCAACGGGUUCCCAGAGUUUGGGGAGCGCCUCACCAUCAAGCAUAGAGAUACCCCAAGCACAAUACCUCCACCGUUGAAGGGUUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012603647.1 |
|
3.0 | PREDICTED: Gossypium raimondii uncharacterized LOC105779743 (LOC105779743), transcript variant X2, mRNA | uncharacterized LOC105779743(LOC105779743) | coding protein | psRNATarget | |||||||||
| XM_012603646.1 |
|
3.0 | PREDICTED: Gossypium raimondii uncharacterized LOC105779743 (LOC105779743), transcript variant X1, mRNA | uncharacterized LOC105779743(LOC105779743) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |