| ncRNA ID | gra-miR3267 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr6:6562309-6562409 [-] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 70 - UCUGUCGCAGGGGAGAUGGCUG - 91 |
| Stem-loop(if miRNA) |
CA U A G C U CCUAU GGUGGGGUUCUG CGC GG GAGAUGGCUGGU CAU CAUG GCU |||||||||||| ||| || |||||||||||| ||| |||| ||A CUACCUCAAGAC GCG CC CUCUACCGACUA GUA GUAU CGU AC C - A C U -UAAC |
| Stem-loop sequence | CAGGUGGGGUUCUGUCGCAGGGGAGAUGGCUGGUCCAUUCAUGCCUAUGCUAUGCCAAUUAUGUAUGCAUCAGCCAUCUCACCGCGCCAGAACUCCAUCCA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012599970.1 |
|
2.5 | PREDICTED: Gossypium raimondii calcium-transporting ATPase 9, plasma membrane-type-like (LOC105776976), transcript variant X2, mRNA | calcium-transporting ATPase 9, plasma membrane-type-like(LOC105776976) | coding protein | psRNATarget | |||||||||
| XM_012599969.1 |
|
2.5 | PREDICTED: Gossypium raimondii calcium-transporting ATPase 9, plasma membrane-type-like (LOC105776976), transcript variant X1, mRNA | calcium-transporting ATPase 9, plasma membrane-type-like(LOC105776976) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |