| ncRNA ID | gra-miR8722 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr6:6377888-6378011 [+] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 83 - CAUGUUUUUCCUGUUCAUCUUC - 104 |
| Stem-loop(if miRNA) |
---- G CU - ----GGCA G GUU CAAGAU ACUUGAGAAGAUGAA AGGAAAAACAUGGAACUUGA GGGCA U ||| |||||| ||||||||||||||| |||||||||||||||||||| ||||| U CAG GUUUUA UGAACUCUUCUACUU UCCUUUUUGUACCUUGAACU CUCGU C AUGG - -U G ACAUAAAC A |
| Stem-loop sequence | GUUGCAAGAUCUACUUGAGAAGAUGAAAGGAAAAACAUGGAACUUGAGGCAGGGCAGUUCAUGCUCCAAAUACAUCAAGUUCCAUGUUUUUCCUGUUCAUCUUCUCAAGUUAUUUUGGACGGUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012598000.1 |
|
1.5 | PREDICTED: Gossypium raimondii agamous-like MADS-box protein AGL92 (LOC105775489), mRNA | agamous-like MADS-box protein AGL92(LOC105775489) | coding protein | psRNATarget | |||||||||
| XM_012637268.1 |
|
2.0 | PREDICTED: Gossypium raimondii uncharacterized LOC105804596 (LOC105804596), transcript variant X1, mRNA | uncharacterized LOC105804596(LOC105804596) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |