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BaseInfo

ncRNA ID gra-miR8690
Species Gossypium raimondii
Class miRNA
Genome position chr5:62497766-62497908 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - AGAGUGACUACUUCGUAACAAAAC - 34
Stem-loop(if miRNA) UUAA     C     A                 A   AUUAA       UAGCUCCCUAACGGCAGUCUUAC
    AUUAU GUUUU UUACGAAGUGGUCAUUC ACU     GCUGCGU                       G
    ||||| ||||| ||||||||||||||||| |||     |||||||
    UAAUA CAAAA AAUGCUUCAUCAGUGAG UGA     AUUUAAG                       U
CAUA     A     C                 A   ---CA       GCAAUUUUGGAUAAACCUGAUGA
Stem-loop sequence UUAAAUUAUCGUUUUAUUACGAAGUGGUCAUUCAACUAUUAAGCUGCGUUAGCUCCCUAACGGCAGUCUUACGUAGUAGUCCAAAUAGGUUUUAACGGAAUUUAACAGUAGAGUGACUACUUCGUAACAAAACAAUAAUAUAC

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).