ncRNA ID | gra-miR8690 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr5:62497766-62497908 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - AGAGUGACUACUUCGUAACAAAAC - 34 |
Stem-loop(if miRNA) |
UUAA     C     A                 A   AUUAA       UAGCUCCCUAACGGCAGUCUUAC     AUUAU GUUUU UUACGAAGUGGUCAUUC ACU     GCUGCGU                       G     ||||| ||||| ||||||||||||||||| |||     |||||||     UAAUA CAAAA AAUGCUUCAUCAGUGAG UGA     AUUUAAG                       U CAUA     A     C                 A   ---CA       GCAAUUUUGGAUAAACCUGAUGA |
Stem-loop sequence | UUAAAUUAUCGUUUUAUUACGAAGUGGUCAUUCAACUAUUAAGCUGCGUUAGCUCCCUAACGGCAGUCUUACGUAGUAGUCCAAAUAGGUUUUAACGGAAUUUAACAGUAGAGUGACUACUUCGUAACAAAACAAUAAUAUAC |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |