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BaseInfo

ncRNA ID gra-miR8726
Species Gossypium raimondii
Class miRNA
Genome position chr5:61906313-61906455 [-]
Reference genome Graimondii2_0
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - CGAUGGAGUCUGGAGACAAAA - 31
Stem-loop(if miRNA) CA C  GA            U               AGCA       CA  UGAUCAGGUUAUCAGCACAA
  G UC  GGUUUUGUCUCC GAUUCCAUCGAGAGC    CGGGAUU  CU                    U
  | ||  |||||||||||| |||||||||||||||    |||||||  ||
  C AG  CCAAAACAGAGG CUGAGGUAGCUCUUG    GCCCUAA  CG                    C
AA C  AC            U               GCAC       -A  CCUCACCCCCACGGAACAGA
Stem-loop sequence CAGCUCGAGGUUUUGUCUCCUGAUUCCAUCGAGAGCAGCACGGGAUUCACUUGAUCAGGUUAUCAGCACAAUCAGACAAGGCACCCCCACUCCGCAAAUCCCGCACGGUUCUCGAUGGAGUCUGGAGACAAAACCCAGACCAA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).