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BaseInfo

ncRNA ID	ath-miR5656
Species	Arabidopsis thaliana
Class	miRNA
Genome position	chr1:1727263-1727415 [+]
Reference genome	TAIR10
Source	miRBase
Length	21
Mature sequence(if miRNA)	89 - ACUGAAGUAGAGAUUGGGUUU - 109
Stem-loop(if miRNA)	A  UUU           U   A        C    U         C      U AUCUUUCUUGACAAAUCAUAAC AC   GGUUAAAAGGU UCG AAACUCAA CUCU CUUCAGUCU UCUCUU C |||||||||||||||||||||| ||   ||||||||||| ||| |||||||| |||| ||||||||| |||||| C UGGAAGGAGCUGUUUAGUAUUG UG   CCGGUUUUCCA AGC UUUGGGUU GAGA GAAGUCAGA AGGGAA A                       C  UAC           U   C        A    U         A      A
Stem-loop sequence	AUCUUUCUUGACAAAUCAUAACAACUUUGGUUAAAAGGUUUCGAAAACUCAACCUCUUCUUCAGUCUCUCUCUUUCCAAAAGGGAAAGACUGAAGUAGAGAUUGGGUUUCCGAUACCUUUUGGCCCAUGUCGUUAUGAUUUGUCGAGGAAGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_104906.2	ncRNA:21   UUUGGGUUAGAGAUGAAGUCA   1   ||||=|**||||||||||||| targets:114   AAACUCUUUCUCUACUUCAGU   134 Target Full Sequence	3.0	Arabidopsis thaliana mitochondrial editing factor 9 (MEF9), mRNA	mitochondrial editing factor 9(MEF9)	coding protein	psRNATarget

Reference

1	PMID:21940835 "High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"; Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN; Genome Res. 22:163-176(2012).