ncRNA ID | gra-miR8713 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr5:59328455-59328633 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - AUGACUGUUUUAAUGAAGAUUGCG - 34 |
Stem-loop(if miRNA) |
GAGA A GA A A --A CU UAAGUUAUGACUGUUUUA UGAAGAUUGCGCGAGUAAAAUUUC GACG GAUUAUUAC AAAAUUAUGAGUUUU AGCUU A |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| ||||||||||||||| ||||| A AUUCAAUACUGGUAAAAU ACUUCUAACGCGCUCAUUUUAAAG CUGC CUAAUAAUG UUUUAAUACUCAAAG UUGAG U AAAA C AC C C AAC CU |
Stem-loop sequence | GAGAUAAGUUAUGACUGUUUUAAUGAAGAUUGCGCGAGUAAAAUUUCGAGACGAGAUUAUUACAAAAAUUAUGAGUUUUAAGCUUCUAAUUCGAGUUCAAGAAACUCAUAAUUUUCGUAAUAAUCCCGUCCAGAAAUUUUACUCGCGCAAUCUUCACUAAAAUGGUCAUAACUUAAAAA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |