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BaseInfo

ncRNA ID	gra-miR8774
Species	Gossypium raimondii
Class	miRNA
Genome position	chr5:54903390-54903530 [+]
Reference genome	Graimondii2_0
Source	miRBase
Length	24
Mature sequence(if miRNA)	11 - UUGGAUUUUGAUUCAUAGAUUCGU - 34
Stem-loop(if miRNA)	ACAAAACUG        U     --        C    UGUUCAAAC     UU  AAUUAUAUUUAAUUUGGU          UUUGGAUU UGAUU  CAUAGAUU GUGA         UAUCA  UU                  G          |||||||| |||||  |||||||| ||||         |||||  ||                  A          GAACCUAA AUUAA  GUGUUUAA UAUU         UGAAA  AU                  A AUAAAAAUU        U     AU        U    ------UAU     --  UAUUGCAUUAUUUUUAUU
Stem-loop sequence	ACAAAACUGUUUGGAUUUUGAUUCAUAGAUUCGUGAUGUUCAAACUAUCAUUUUAAUUAUAUUUAAUUUGGUGAAUUAUUUUUAUUACGUUAUUAAAAGUUAUUUAUUAAUUUGUGUAAAUUAUAAUCCAAGUUAAAAAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012589354.1	ncRNA:24   UGCUUAGAUACUUAGUUUUAGGUU   1   *=**||=||||=|||||||||||| targets:1236   CUAUAUUUAUGGAUCAAAAUCCAA   1259 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii UDP-glycosyltransferase 87A1-like (LOC105769012), mRNA	UDP-glycosyltransferase 87A1-like(LOC105769012)	coding protein	psRNATarget

Reference

1	PMID:24044642 "Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013).