ncRNA ID | gra-miR8783 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr5:42120810-42121007 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - UUUGUACGUGGCGGGAGAUAU - 31 |
Stem-loop(if miRNA) |
-           U    CG                        ---------C      C    --AAAC     UCUUAGAUAUUAGAAAAAUAAAAGACCGA  AUUUGCUCCUU UGUA  UGGCGGGAGAUAUUGGAGGGAAAA          CAUUUU UUAC      GUAUC                             A  ||||||||||| ||||  ||||||||||||||||||||||||          |||||| ||||      |||||                             U  UAAACGAGGAA ACAU  ACCGCCCUCUAUAACCUCCCUUUU          GUAAAA AAUG      GGUUU                             U A           U    AU                        UUUUAUAAUC      -    AAGCCG     AGGUGGUCAAAGAUUAUUAGAAUAGAAAU |
Stem-loop sequence | AUUUGCUCCUUUUGUACGUGGCGGGAGAUAUUGGAGGGAAAACCAUUUUCUUACAAACGUAUCUCUUAGAUAUUAGAAAAAUAAAAGACCGAAUUUAAAGAUAAGAUUAUUAGAAACUGGUGGAUUUGGGCCGAAGUAAAAAAUGCUAAUAUUUUUUUUCCCUCCAAUAUCUCCCGCCAUAUACAUAAGGAGCAAAUA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |