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BaseInfo

ncRNA ID gra-miR8659b
Species Gossypium raimondii
Class miRNA
Genome position chr5:40491855-40491973 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 86 - AAUUUUUUAAGGUUGUUUGUGGAA - 109
Stem-loop(if miRNA) A      -AG C           AG              A    CAAAAUAUUU     U
 GGUUUU   A UCCACAAACAG  UUAAGGAAUUGACA GUGU          AAAUA A
 ||||||   | |||||||||||  |||||||||||||| ||||          |||||
 CUAAAA   U AGGUGUUUGUU  AAUUUUUUAACUGU CACA          UUUAU U
-      GAA A           GG              A    -AAAAAAAAU     A
Stem-loop sequence AGGUUUUAGACUCCACAAACAGAGUUAAGGAAUUGACAAGUGUCAAAAUAUUUAAAUAUAUAUAUUUUAAAAAAAAACACAUGUCAAUUUUUUAAGGUUGUUUGUGGAAUAAGAAAAUC

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).