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BaseInfo

ncRNA ID gra-miR8705
Species Gossypium raimondii
Class miRNA
Genome position chr5:15853753-15854164 [-]
Reference genome Graimondii2_0
Source miRBase
Length 23
Mature sequence(if miRNA) 380 - AGUUCAUACUAGUUCGUGGGUCA - 402
Stem-loop(if miRNA) AU       ------------  GUUCAUACUAGUUCGUGGGUCAAUUAGAUUUUUACCUCUCACUGAAUUGAUAACUUAUUUUGUUCUUAAUCCAAUCAGUCCAACCAGUUUAGAUAACAUUGAAUUUUGAUCUUUUUUAUAUUUUUAAAAUAUUUUUUCAAAGAAGUCUUUAUUUUUGGAUUUUAAAAUGUUCUUUUUUUUCAUAUUUU
  GUUCAAC            CA                                                                                                                                                                                            U
  |||||||            ||
  UAAGUUG            AG                                                                                                                                                                                            A
AU       AAUAAAAAAUCA  UCAGUCUAGUCAAGUAAAAUUAAGCGCACAGUUGGCUAAAAUUUUGAAAAUUUGAUAAAAUCAAGAAUUGUAAAUGUUAAAAAACAGUUAAACCAAAUAUGGGAAAUUUUUAUGCAUUAAAAAAUUUUAAUUUUUAAUAGUAAAAAGAAUAAAAUUUGUGUUUAUACAAAUUUUUAUAAAAAAUUUGC
Stem-loop sequence AUGUUCAACCAGUUCAUACUAGUUCGUGGGUCAAUUAGAUUUUUACCUCUCACUGAAUUGAUAACUUAUUUUGUUCUUAAUCCAAUCAGUCCAACCAGUUUAGAUAACAUUGAAUUUUGAUCUUUUUUAUAUUUUUAAAAUAUUUUUUCAAAGAAGUCUUUAUUUUUGGAUUUUAAAAUGUUCUUUUUUUUCAUAUUUUUACGUUUAAAAAAUAUUUUUAAACAUAUUUGUGUUUAAAAUAAGAAAAAUGAUAAUUUUUAAUUUUAAAAAAUUACGUAUUUUUAAAGGGUAUAAACCAAAUUGACAAAAAAUUGUAAAUGUUAAGAACUAAAAUAGUUUAAAAGUUUUAAAAUCGGUUGACACGCGAAUUAAAAUGAACUGAUCUGACUGAACUAAAAAAUAAGUUGAAUUA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).