ncRNA ID | gra-miR8694a |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr5:15218854-15218993 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - AGGAUGCACUGUCAGCAAAAGUAU - 34 |
Stem-loop(if miRNA) |
U  A               U                           AGG       ACC      U AC  GC CCAAGCAGGAUGCAC GUCAGCAAAAGUAUUGAAAGCGUGUCU   UGGAAGC   UUCAGU G  A  || ||||||||||||||| |||||||||||||||||||||||||||   |||||||   |||||| |  UG GGUUUGUCCUGCGUG UAGUCGUUUUCAUGAUUUUCGCGUAGG   ACCUUCG   AAGUCA C  U G  A               -                           CAG       CAA      - GG |
Stem-loop sequence | UGCACCAAGCAGGAUGCACUGUCAGCAAAAGUAUUGAAAGCGUGUCUAGGUGGAAGCACCUUCAGUUGACAUGGCACUGAAAACGCUUCCAGACGGAUGCGCUUUUAGUACUUUUGCUGAUGUGCGUCCUGUUUGGAGUG |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |