ncRNA ID | gra-miR7504f |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr5:11144827-11144950 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - AGGAGAAAAAAAUCUGAUUUGUCA - 34 |
Stem-loop(if miRNA) |
AAUAA                      -C           --CA  C     CUCCAGAAAA      GAGAAUGAUAAAUCAGAUUUUU  UUCUUGAUUUU    GC UUUUC          A      ||||||||||||||||||||||  |||||||||||    || |||||          A      CUCUUACUGUUUAGUCUAAAAA  GAGGACUAAAA    CG AAAUU          U UUACC                      AA           AACA  A     AAACUAAAUU |
Stem-loop sequence | AAUAAGAGAAUGAUAAAUCAGAUUUUUCUUCUUGAUUUUCAGCCUUUUCCUCCAGAAAAAAUUUAAAUCAAAUUAAAAGCACAAAAAAUCAGGAGAAAAAAAUCUGAUUUGUCAUUCUCCCAUU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |