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BaseInfo

ncRNA ID gra-miR7504f
Species Gossypium raimondii
Class miRNA
Genome position chr5:11144827-11144950 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - AGGAGAAAAAAAUCUGAUUUGUCA - 34
Stem-loop(if miRNA) AAUAA                      -C           --CA  C     CUCCAGAAAA
     GAGAAUGAUAAAUCAGAUUUUU  UUCUUGAUUUU    GC UUUUC          A
     ||||||||||||||||||||||  |||||||||||    || |||||          A
     CUCUUACUGUUUAGUCUAAAAA  GAGGACUAAAA    CG AAAUU          U
UUACC                      AA           AACA  A     AAACUAAAUU
Stem-loop sequence AAUAAGAGAAUGAUAAAUCAGAUUUUUCUUCUUGAUUUUCAGCCUUUUCCUCCAGAAAAAAUUUAAAUCAAAUUAAAAGCACAAAAAAUCAGGAGAAAAAAAUCUGAUUUGUCAUUCUCCCAUU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).