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BaseInfo

ncRNA ID gra-miR7493b
Species Gossypium raimondii
Class miRNA
Genome position chr4:60486648-60486916 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - UUGGAUUGUUAAAAGGUUAAUUGU - 34
Stem-loop(if miRNA) U        G          A      UG      C   CAU     A  UUCCAUCCAUAUAGA    G       -----------------AACUUUA  --  U -      AU  UUUAUUUUAUGUAAAAAACUAUUAA
 AUUUUUUU UACGAUUAAC UUUUAA  AUUCAA CGC   AUUUU CA               UCAU CAUGUAA                        AA  UA U UUUUUA  UA                         U
 |||||||| |||||||||| ||||||  |||||| |||   ||||| ||               |||| |||||||                        ||  || | ||||||  ||                         U
 UAAAAAAA AUGUUAAUUG AAAAUU  UAGGUU GCG   UAAAA GU               AGUG GUACGUU                        UA  AA A UUAUAA  UU                         G
-        A          G      GU      A   ACU     A  UAUAUUAACAUGAAC    G       AAAAACCUGGCUAAACUAUAGAAA  GU  - G      --  UUUCUCAUAUAAUUAUAAAUAAUUU
Stem-loop sequence UAUUUUUUUGUACGAUUAACAUUUUAAUGAUUCAACCGCCAUAUUUUACAUUCCAUCCAUAUAGAUCAUGCAUGUAAAACUUUAAAUAUUUUUUUAAUUAUUUAUUUUAUGUAAAAAACUAUUAAUUGUUUAAUAAAUAUUAAUAUACUCUUUUUAAUAUUGAAAUGAUAAAGAUAUCAAAUCGGUCCAAAAAUUGCAUGGGUGACAAGUACAAUUAUAUUGAAAAAUUCAGCGAUUGGAUUGUUAAAAGGUUAAUUGUAAAAAAAAAU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).