ncRNA ID | gra-miR8724 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr4:57593998-57594131 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 23 |
Mature sequence(if miRNA) | 11 - CCUGACAUGUCAGUAGAAAGCUC - 33 |
Stem-loop(if miRNA) |
CC                             AU        AUC  GU    C UA    CUU       AACUGGAUGAGCUUUUUGCUGACAUGUCA  GAAAGUGC   CA  UGGA G  UUUU   UGGAA   |||||||||||||||||||||||||||||  ||||||||   ||  |||| |  ||||   ||||U   UUGAUCUACUCGAAAGAUGACUGUACAGU  UUUUCGCG   GU  ACCU C  AAAG   ACUUU GA                             CC        CAA  UG    U GC    ---     |
Stem-loop sequence | CCAACUGGAUGAGCUUUUUGCUGACAUGUCAAUGAAAGUGCAUCCAGUUGGACGUAUUUUCUUUGGAAUUUUCAGAAACGCUUCCAGUUGAACGCGCUUUUCCUGACAUGUCAGUAGAAAGCUCAUCUAGUUAG |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |