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BaseInfo

ncRNA ID gra-miR8724
Species Gossypium raimondii
Class miRNA
Genome position chr4:57593998-57594131 [-]
Reference genome Graimondii2_0
Source miRBase
Length 23
Mature sequence(if miRNA) 11 - CCUGACAUGUCAGUAGAAAGCUC - 33
Stem-loop(if miRNA) CC                             AU        AUC  GU    C UA    CUU    
  AACUGGAUGAGCUUUUUGCUGACAUGUCA  GAAAGUGC   CA  UGGA G  UUUU   UGGAA
  |||||||||||||||||||||||||||||  ||||||||   ||  |||| |  ||||   ||||U
  UUGAUCUACUCGAAAGAUGACUGUACAGU  UUUUCGCG   GU  ACCU C  AAAG   ACUUU
GA                             CC        CAA  UG    U GC    ---    
Stem-loop sequence CCAACUGGAUGAGCUUUUUGCUGACAUGUCAAUGAAAGUGCAUCCAGUUGGACGUAUUUUCUUUGGAAUUUUCAGAAACGCUUCCAGUUGAACGCGCUUUUCCUGACAUGUCAGUAGAAAGCUCAUCUAGUUAG

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).