ncRNA ID | gra-miR7503b |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr4:47305059-47305264 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 173 - AACCGAUGGUUGAACAUGUUAGAC - 196 |
Stem-loop(if miRNA) |
-       C      G           U                -U   UUCAACCAGUUCGAUCGAUUCGACUGUGGGACCAAGUAAAAUUGGUUUUUUAUU  UUAAUAA CGAACC AUGGUUGAACA GUUAGACCACUAGUUC  CGA                                                      U  ||||||| |||||| ||||||||||| ||||||||||||||||  |||  AAUUAUU GCUUGG UACCAAUUUGU CAAUCUGGUGGUCAAG  AGC                                                      U A       A      A           C                CC   UAAGCUAACAGUUUGGUUGUUAUUAAUUUUCAAGUGUUUUUAGAUUUUUUUAUU |
Stem-loop sequence | UUAAUAACCGAACCGAUGGUUGAACAUGUUAGACCACUAGUUCUCGAUUCAACCAGUUCGAUCGAUUCGACUGUGGGACCAAGUAAAAUUGGUUUUUUAUUUUUUAUUUUUUUAGAUUUUUGUGAACUUUUAAUUAUUGUUGGUUUGACAAUCGAAUCGACCGAACUGGUGGUCUAACCUGUUUAACCAUAGGUUCGAUUAUUAAA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |