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BaseInfo

ncRNA ID gra-miR477
Species Gossypium raimondii
Class miRNA
Genome position chr4:43300210-43300317 [-]
Reference genome Graimondii2_0
Source miRBase
Length 21
Mature sequence(if miRNA) 21 - CGAAGUCUUGGAAGAGAGUAA - 41
Stem-loop(if miRNA) -UGUA    -    CC                  A      A    GCUAU    AA
     CAUG CAAC  UUUUUUACUCUCUUCCAA GGCUUC AGCU     AUGA  A
     |||| ||||  |||||||||||||||||| |||||| ||||     ||||
     GUAC GUUG  AAGAAAUGAGAGAAGGUU CUGAAG UUGA     UACU  C
UUUUA    U    AA                  -      C    -----    AA
Stem-loop sequence UGUACAUGCAACCCUUUUUUACUCUCUUCCAAAGGCUUCAAGCUGCUAUAUGAAAACAAUCAUAGUUCGAAGUCUUGGAAGAGAGUAAAGAAAAGUUGUCAUGAUUUU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).