ncRNA ID | gra-miR477 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr4:43300210-43300317 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 21 - CGAAGUCUUGGAAGAGAGUAA - 41 |
Stem-loop(if miRNA) |
-UGUA    -    CC                  A      A    GCUAU    AA      CAUG CAAC  UUUUUUACUCUCUUCCAA GGCUUC AGCU     AUGA  A      |||| ||||  |||||||||||||||||| |||||| ||||     ||||      GUAC GUUG  AAGAAAUGAGAGAAGGUU CUGAAG UUGA     UACU  C UUUUA    U    AA                  -      C    -----    AA |
Stem-loop sequence | UGUACAUGCAACCCUUUUUUACUCUCUUCCAAAGGCUUCAAGCUGCUAUAUGAAAACAAUCAUAGUUCGAAGUCUUGGAAGAGAGUAAAGAAAAGUUGUCAUGAUUUU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |