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BaseInfo

ncRNA ID gra-miR8751b
Species Gossypium raimondii
Class miRNA
Genome position chr4:33504208-33504408 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - UGAAAUUUGUAGAGAGAUAACGCU - 34
Stem-loop(if miRNA) AAAU                            C      C     C                   A      C  C     G   GA    --------   AC
    GGAGGUUGAAAUUUGUAGAGAGAUAACG UCCAAG AGGAU CACUGUCAGCAAGAGUACU AAAGCA GU CAACU GAA  GCAU        CCA  U
    |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||| || ||||| |||  ||||        |||  A
    CCUCCAACUUUAAACAUCUCUCUAUUGU AGGUUC UCCUG GUGACAGUCGUUCUCAUGA UUUCGU CA GUUGA CUU  UGUA        GGU  A
UCAC                            A      A     C                   C      U  A     G   --    AAAGCCAC   AC
Stem-loop sequence AAAUGGAGGUUGAAAUUUGUAGAGAGAUAACGCUCCAAGCAGGAUCCACUGUCAGCAAGAGUACUAAAAGCACGUCCAACUGGAAGAGCAUCCAACUAACAUGGCACCGAAAAUGUUUCGAGUUGAACUUGCUUUCAGUACUCUUGCUGACAGUGCGUCCUACUUGGAAUGUUAUCUCUCUACAAAUUUCAACCUCCCACU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).