ncRNA ID | gra-miR8751b |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr4:33504208-33504408 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - UGAAAUUUGUAGAGAGAUAACGCU - 34 |
Stem-loop(if miRNA) |
AAAU                            C      C     C                   A      C  C     G   GA    --------   AC     GGAGGUUGAAAUUUGUAGAGAGAUAACG UCCAAG AGGAU CACUGUCAGCAAGAGUACU AAAGCA GU CAACU GAA  GCAU        CCA  U     |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||| || ||||| |||  ||||        |||  A     CCUCCAACUUUAAACAUCUCUCUAUUGU AGGUUC UCCUG GUGACAGUCGUUCUCAUGA UUUCGU CA GUUGA CUU  UGUA        GGU  A UCAC                            A      A     C                   C      U  A     G   --    AAAGCCAC   AC |
Stem-loop sequence | AAAUGGAGGUUGAAAUUUGUAGAGAGAUAACGCUCCAAGCAGGAUCCACUGUCAGCAAGAGUACUAAAAGCACGUCCAACUGGAAGAGCAUCCAACUAACAUGGCACCGAAAAUGUUUCGAGUUGAACUUGCUUUCAGUACUCUUGCUGACAGUGCGUCCUACUUGGAAUGUUAUCUCUCUACAAAUUUCAACCUCCCACU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |