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BaseInfo

ncRNA ID gra-miR8691
Species Gossypium raimondii
Class miRNA
Genome position chr4:19643915-19644088 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - AGAUGAUGAGAAAGGAAAGUCAAG - 34
Stem-loop(if miRNA) UGCUU           U             CAA  UG  U   C    ----UU      UAUUUGAUUGGUUUGUUAUGUUCAUGUUA
     UUUUUAGAUGA GAGAAAGGAAAGU   GA  AA GAA AAGU      GAUUUU                             G
     ||||||||||| |||||||||||||   ||  || ||| ||||      ||||||
     AAAGGUUUAUU UUUUUUUCUUUUA   UU  UU CUU UUCG      AUUUAG                             U
UUAUU           -             AGG  GU  -   C    UGUCUA      GAGUCUGGAUCAAAUUCUGAAAAAUGGUC
Stem-loop sequence UGCUUUUUUUAGAUGAUGAGAAAGGAAAGUCAAGAUGAAUGAACAAGUUUGAUUUUUAUUUGAUUGGUUUGUUAUGUUCAUGUUAGUCUGGUAAAAAGUCUUAAACUAGGUCUGAGGAUUUAAUCUGUGCUUCUUCUUUGUUGGAAUUUUCUUUUUUUUUAUUUGGAAAUUAUU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).