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BaseInfo

ncRNA ID gra-miR7492o
Species Gossypium raimondii
Class miRNA
Genome position chr3:36809913-36810186 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - CUAAAGAUCUGAGCAUUAGUGGCG - 34
Stem-loop(if miRNA) -                   U     U        C   CU AA          A       ---UG       -     GCUUUUUUUAAAAACGCCGCUAAAGAUCUGAAAGGUACAAAACGAUGUCGUUGGACUUA
 AAAAACGCCGCUAAAGAUC GAGCA UAGUGGCG UUU  C  AAAAUGCCGC AAAGAUC     AGCAUUA GCGGC                                                           G
 ||||||||||||||||||| ||||| |||||||| |||  |  |||||||||| |||||||     ||||||| |||||                                                           A
 UUUUUGCGGUGAUUUUUAG CUCGU AUCGCCGC AAA  G  UUUUGCGGCG UUUCUAG     AAUCGCC CAAAG                                                           C
U                   -     U        -   AU CA          A       CUCGC       A     AUCCUUUCGCGGCGAUUUUUAAUCGUAAUCGCCGCAAAAAGCUUUUUUGCGGCGUUUUU
Stem-loop sequence AAAAACGCCGCUAAAGAUCUGAGCAUUAGUGGCGCUUUCUCAAAAAAUGCCGCAAAAGAUCUGAGCAUUAGCGGCGCUUUUUUUAAAAACGCCGCUAAAGAUCUGAAAGGUACAAAACGAUGUCGUUGGACUUAGACUUUUUGCGGCGUUUUUUCGAAAAACGCCGCUAAUGCUAAUUUUUAGCGGCGCUUUCCUAGAAACACCGCUAACGCUCGAUCUUUAGCGGCGUUUUACGUAAAACGCCGCUAUUGCUCGAUUUUUAGUGGCGUUUUUU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).