ncRNA ID | gra-miR7492o |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr3:36809913-36810186 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - CUAAAGAUCUGAGCAUUAGUGGCG - 34 |
Stem-loop(if miRNA) |
-                   U     U        C   CU AA          A       ---UG       -     GCUUUUUUUAAAAACGCCGCUAAAGAUCUGAAAGGUACAAAACGAUGUCGUUGGACUUA  AAAAACGCCGCUAAAGAUC GAGCA UAGUGGCG UUU  C  AAAAUGCCGC AAAGAUC     AGCAUUA GCGGC                                                           G  ||||||||||||||||||| ||||| |||||||| |||  |  |||||||||| |||||||     ||||||| |||||                                                           A  UUUUUGCGGUGAUUUUUAG CUCGU AUCGCCGC AAA  G  UUUUGCGGCG UUUCUAG     AAUCGCC CAAAG                                                           C U                   -     U        -   AU CA          A       CUCGC       A     AUCCUUUCGCGGCGAUUUUUAAUCGUAAUCGCCGCAAAAAGCUUUUUUGCGGCGUUUUU |
Stem-loop sequence | AAAAACGCCGCUAAAGAUCUGAGCAUUAGUGGCGCUUUCUCAAAAAAUGCCGCAAAAGAUCUGAGCAUUAGCGGCGCUUUUUUUAAAAACGCCGCUAAAGAUCUGAAAGGUACAAAACGAUGUCGUUGGACUUAGACUUUUUGCGGCGUUUUUUCGAAAAACGCCGCUAAUGCUAAUUUUUAGCGGCGCUUUCCUAGAAACACCGCUAACGCUCGAUCUUUAGCGGCGUUUUACGUAAAACGCCGCUAUUGCUCGAUUUUUAGUGGCGUUUUUU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |