ncRNA ID | gra-miR7504c |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr3:35987172-35987297 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 93 - AAGAGAAAAAAUCGGAUUUAUCAU - 116 |
Stem-loop(if miRNA) |
U     GA             A          UC   U      CU    CCUCCUAAAAAA  CAAUA  AGAAUGAUAAAUC GAUUUUUUCU  UGA UUUUAG  UUUU            A  |||||  ||||||||||||| ||||||||||  ||| ||||||  ||||            A  GUUAU  UCUUACUAUUUAG CUAAAAAAGA  ACU AAAAUC  AAAA            U -     UC             G          GA   C      AU    AUCAACCUAAAC |
Stem-loop sequence | UCAAUAGAAGAAUGAUAAAUCAGAUUUUUUCUUCUGAUUUUUAGCUUUUUCCUCCUAAAAAAAAUCAAAUCCAACUAAAAAUACUAAAACUCAAGAGAAAAAAUCGGAUUUAUCAUUCUCUUAUUG |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |