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BaseInfo

ncRNA ID gra-miR7504c
Species Gossypium raimondii
Class miRNA
Genome position chr3:35987172-35987297 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 93 - AAGAGAAAAAAUCGGAUUUAUCAU - 116
Stem-loop(if miRNA) U     GA             A          UC   U      CU    CCUCCUAAAAAA
 CAAUA  AGAAUGAUAAAUC GAUUUUUUCU  UGA UUUUAG  UUUU            A
 |||||  ||||||||||||| ||||||||||  ||| ||||||  ||||            A
 GUUAU  UCUUACUAUUUAG CUAAAAAAGA  ACU AAAAUC  AAAA            U
-     UC             G          GA   C      AU    AUCAACCUAAAC
Stem-loop sequence UCAAUAGAAGAAUGAUAAAUCAGAUUUUUUCUUCUGAUUUUUAGCUUUUUCCUCCUAAAAAAAAUCAAAUCCAACUAAAAAUACUAAAACUCAAGAGAAAAAAUCGGAUUUAUCAUUCUCUUAUUG

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).