ncRNA ID | gra-miR8761 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr3:9712218-9712434 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - UGUUGACGUUGCAUACAUGUGGAU - 34 |
Stem-loop(if miRNA) |
UUUAAA             U     C        --A   UGUCAAUAUUUACUUAAUUUUUAAAAUUUUAAAAUUAAAAAAAUUAUAAAAACUUUUUAAAAAUUAAA       ACUUUGUUGACGU GCAUA AUGUGGAU   GCA                                                                    A       ||||||||||||| ||||| ||||||||   |||                                                                    A       UGAAACGACUGCA CGUAU UGUACCUA   GUG                                                                    A AGCAAA             C     A        ACG   GAUCUACUGUACAGUUUUAAAUUAAAUGAAAAAUUUUAAAAAUUUUAUAUAAAAAAUUUUAAAAUUAC |
Stem-loop sequence | UUUAAAACUUUGUUGACGUUGCAUACAUGUGGAUAGCAUGUCAAUAUUUACUUAAUUUUUAAAAUUUUAAAAUUAAAAAAAUUAUAAAAACUUUUUAAAAAUUAAAAAACAUUAAAAUUUUAAAAAAUAUAUUUUAAAAAUUUUAAAAAGUAAAUUAAAUUUUGACAUGUCAUCUAGGUGGCAAUCCAUGUAUAUGCCACGUCAGCAAAGUAAACGA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |