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BaseInfo

ncRNA ID gra-miR8761
Species Gossypium raimondii
Class miRNA
Genome position chr3:9712218-9712434 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - UGUUGACGUUGCAUACAUGUGGAU - 34
Stem-loop(if miRNA) UUUAAA             U     C        --A   UGUCAAUAUUUACUUAAUUUUUAAAAUUUUAAAAUUAAAAAAAUUAUAAAAACUUUUUAAAAAUUAAA
      ACUUUGUUGACGU GCAUA AUGUGGAU   GCA                                                                    A
      ||||||||||||| ||||| ||||||||   |||                                                                    A
      UGAAACGACUGCA CGUAU UGUACCUA   GUG                                                                    A
AGCAAA             C     A        ACG   GAUCUACUGUACAGUUUUAAAUUAAAUGAAAAAUUUUAAAAAUUUUAUAUAAAAAAUUUUAAAAUUAC
Stem-loop sequence UUUAAAACUUUGUUGACGUUGCAUACAUGUGGAUAGCAUGUCAAUAUUUACUUAAUUUUUAAAAUUUUAAAAUUAAAAAAAUUAUAAAAACUUUUUAAAAAUUAAAAAACAUUAAAAUUUUAAAAAAUAUAUUUUAAAAAUUUUAAAAAGUAAAUUAAAUUUUGACAUGUCAUCUAGGUGGCAAUCCAUGUAUAUGCCACGUCAGCAAAGUAAACGA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).