ncRNA ID | gra-miR8657b |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr3:5461726-5461934 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 176 - UGUAGUAAUUGUAGAAGUUCAGGG - 199 |
Stem-loop(if miRNA) |
U   C          U             CA   ---------------------------ACUAUUCUGCUAUUUUUCCUUUUCCA    U   UACAAGAUCUUGAUAUAAAAUA  GGA UAAAUUGUAG AAUUGUAGAAGUU  GGG                                                     CGAG AUC                      U  ||| |||||||||| |||||||||||||  |||                                                     |||| |||                      G  CCU AUUUAACGUU UUAACAUUUUCAA  CCC                                                     UACU UUA                      A C   A          U             AC   AUUAAUACAUUUAAAUUUUUUACUUUCCCAUAAUUAACAUUUUACCUAACCUU    -   UAUACGAUUAUUUACUCGUUAA |
Stem-loop sequence | UGGACUAAAUUGUAGUAAUUGUAGAAGUUCAGGGACUAUUCUGCUAUUUUUCCUUUUCCACGAGUAUCUACAAGAUCUUGAUAUAAAAUAUGAAAUUGCUCAUUUAUUAGCAUAUAUUUCAUUUCCAAUCCAUUUUACAAUUAAUACCCUUUCAUUUUUUAAAUUUACAUAAUUACCCCAAACUUUUACAAUUUUUGCAAUUUAAUCCC |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |