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BaseInfo

ncRNA ID gra-miR8661
Species Gossypium raimondii
Class miRNA
Genome position chr3:304604-304711 [+]
Reference genome Graimondii2_0
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - CAUUACUUUUUCAUUCAUUAA - 31
Stem-loop(if miRNA) AGA  A G            UC        -AU   -UA     AUAA     AAC
   UC U UCCAUUACUUUU  AUUCAUUA   UUC   AUUAU    GCAUU   A
   || | ||||||||||||  ||||||||   |||   |||||    |||||
   AG G AGGUAAUGAAAA  UAGGUAAU   AAG   UAAUG    UGUAA   U
CCA  G G            CA        GAU   UUA     ----     ACU
Stem-loop sequence AGAUCAUGUCCAUUACUUUUUCAUUCAUUAAUUUCUAAUUAUAUAAGCAUUAACAUUCAAAUGUGUAAUAUUGAAUAGUAAUGGAUACAAAAGUAAUGGAGGGGAACC

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).