| ncRNA ID | gra-miR7484l |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr2:60358247-60358494 [+] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 23 |
| Mature sequence(if miRNA) | 216 - UUUGAUCUAAUGUAUGGAGACUA - 238 |
| Stem-loop(if miRNA) |
A UC A A --- U C AAUU --ACUA -A UAAUGGAAUAACCGGAUAGUUAUACG AUGGGCAAAUUAGU CUGUAUGUUAGAUUAAAGAGUAAACU C UUCU GUUAAAA UUUUAUCCAUUU UAC UGUUAAAA GC UGGC U |||||||||||||| |||||||||||||||||||||||||| | |||| ||||||| |||||||||||| ||| |||||||| || |||| UAUCCGUUUGAUCA GGUAUGUAAUCUAGUUUCUCGUUUGA G AGGA UAAUUUU AAGGUAGGUGAA AUG ACAAUUUU GG UAUG G - GA - C AAA U A ---- AAACCA GA CAAUCGUACUCCACGUUCAUCAUGCG |
| Stem-loop sequence | AAUGGGCAAAUUAGUUCCUGUAUGUUAGAUUAAAGAGUAAACUACAUUCUGUUAAAAUUUUUAUCCAUUUCUACAAUUUGUUAAAAACUAGCAUGGCUAAUGGAAUAACCGGAUAGUUAUACGUGGCGUACUACUUGCACCUCAUGCUAACGUAUAGGGACCAAAUUUUAACAGUAAAAGUGGAUGGAAUUUUUAAUAAAAGGACGAGUUUGCUCUUUGAUCUAAUGUAUGGAGACUAGUUUGCCUAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012628011.1 |
|
3.0 | PREDICTED: Gossypium raimondii transcription factor PIF4-like (LOC105798095), mRNA | transcription factor PIF4-like(LOC105798095) | coding protein | psRNATarget | |||||||||
| XM_012625869.1 |
|
3.0 | PREDICTED: Gossypium raimondii uncharacterized LOC105796268 (LOC105796268), transcript variant X4, mRNA | uncharacterized LOC105796268(LOC105796268) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |