ncRNA ID | gra-miR8659a |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr2:60344590-60344746 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 124 - AAUUUUUUAAGGUUGUUUGUGGAA - 147 |
Stem-loop(if miRNA) |
-     A      U     A                    UUUUUU    AC  A           G    C UAAAA  GGCAC UGGUAA UUUUU AGGUUGUUUGUGGAAUAAAA      UACU  CA UGUACCAAAUA UAAC C     U  ||||| |||||| ||||| ||||||||||||||||||||      ||||  || ||||||||||| |||| |     A  CUGUG ACCGUU AAAAA UCCGACGAACGCCUUAUUUU      GUGA  GU ACAUGGUUUAU AUUG G     A U     C      C     C                    -UUUAC    CA  C           G    A UAUAA |
Stem-loop sequence | GGCACAUGGUAAUUUUUUAAGGUUGUUUGUGGAAUAAAAUUUUUUUACUACCAAUGUACCAAAUAGUAACCCUAAAAUAAAAUAUGAGUUAGUAUUUGGUACACUGACAGUGCAUUUUUUUAUUCCGCAAGCAGCCUCAAAAACUUGCCACGUGUCU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |