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BaseInfo

ncRNA ID gra-miR8659a
Species Gossypium raimondii
Class miRNA
Genome position chr2:60344590-60344746 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 124 - AAUUUUUUAAGGUUGUUUGUGGAA - 147
Stem-loop(if miRNA) -     A      U     A                    UUUUUU    AC  A           G    C UAAAA
 GGCAC UGGUAA UUUUU AGGUUGUUUGUGGAAUAAAA      UACU  CA UGUACCAAAUA UAAC C     U
 ||||| |||||| ||||| ||||||||||||||||||||      ||||  || ||||||||||| |||| |     A
 CUGUG ACCGUU AAAAA UCCGACGAACGCCUUAUUUU      GUGA  GU ACAUGGUUUAU AUUG G     A
U     C      C     C                    -UUUAC    CA  C           G    A UAUAA
Stem-loop sequence GGCACAUGGUAAUUUUUUAAGGUUGUUUGUGGAAUAAAAUUUUUUUACUACCAAUGUACCAAAUAGUAACCCUAAAAUAAAAUAUGAGUUAGUAUUUGGUACACUGACAGUGCAUUUUUUUAUUCCGCAAGCAGCCUCAAAAACUUGCCACGUGUCU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).