ncRNA ID | gra-miR7504e |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr2:50912389-50912508 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 87 - AGGAGAAAAAAAUCUGAUUUGUCA - 110 |
Stem-loop(if miRNA) |
U       A           U       -C    C         -UA     A   GAAU  AAUAGGA AAUGACAAAUC GAUUUUU  CUCC GAUUUUUAG   UUUCU AUU    U  ||||||| ||||||||||| |||||||  |||| |||||||||   ||||| |||    U  UUAUCUU UUACUGUUUAG CUAAAAA  GAGG CUAAAAGUU   AAAGG UAA    G -       C           U       AA    A         GAA     A   AAAA |
Stem-loop sequence | UAAUAGGAAAAUGACAAAUCUGAUUUUUCCUCCCGAUUUUUAGUAUUUCUAAUUGAAUUUGAAAAAAUAGGAAAAAGUUGAAAAUCAGGAGAAAAAAAUCUGAUUUGUCAUUCUUCUAUU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |