ncRNA ID | gra-miR8786b |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr2:46579967-46580107 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 108 - UUUUAGUGAUGUGGCAGAAAGAUG - 131 |
Stem-loop(if miRNA) |
CA    --                              C                      C       C   AGGU  GCGUUUUUAGUGAUGUGGCAGAAAGAUGCA UGAAAGCGCGCCUUGUUGGACG GUUUUCA C   ||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| U   UCCG  CGCAAAAGUUACUAUACCGUCUUUCUGCGU ACUUUUGCGCGGAACAACCUGC CAAAAGU G GA    UG                              A                      C       A |
Stem-loop sequence | CAAGGUGCGUUUUUAGUGAUGUGGCAGAAAGAUGCACUGAAAGCGCGCCUUGUUGGACGCGUUUUCACCUGAUGAAAACCCGUCCAACAAGGCGCGUUUUCAAUGCGUCUUUCUGCCAUAUCAUUGAAAACGCGUGCCUAG |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |