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BaseInfo

ncRNA ID gra-miR7504g
Species Gossypium raimondii
Class miRNA
Genome position chr2:42701801-42701929 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 96 - AGGAGGAAAUCUGAUUUGUCAUUC - 119
Stem-loop(if miRNA) UC      A                    U            A  UU    ----UCUC     AA
  CAAUGU AGAAUGACAAAUCAGAUUUU CUUUUGAUUUUU GC  UUUU        UUGAA  A
  |||||| |||||||||||||||||||| |||||||||||| ||  ||||        |||||
  GUUACA UCUUACUGUUUAGUCUAAAG GAGGACUAAAAG UG  AAAA        AACUU  A
AA      C                    -            A  UU    UCAACCUA     AA
Stem-loop sequence UCCAAUGUAAGAAUGACAAAUCAGAUUUUUCUUUUGAUUUUUAGCUUUUUUUCUCUUGAAAAAAAAUUCAAAUCCAACUAAAAUUGUAGAAAAUCAGGAGGAAAUCUGAUUUGUCAUUCUCACAUUGAA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).