ncRNA ID | gra-miR7504g |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr2:42701801-42701929 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 96 - AGGAGGAAAUCUGAUUUGUCAUUC - 119 |
Stem-loop(if miRNA) |
UC      A                    U            A  UU    ----UCUC     AA   CAAUGU AGAAUGACAAAUCAGAUUUU CUUUUGAUUUUU GC  UUUU        UUGAA  A   |||||| |||||||||||||||||||| |||||||||||| ||  ||||        |||||   GUUACA UCUUACUGUUUAGUCUAAAG GAGGACUAAAAG UG  AAAA        AACUU  A AA      C                    -            A  UU    UCAACCUA     AA |
Stem-loop sequence | UCCAAUGUAAGAAUGACAAAUCAGAUUUUUCUUUUGAUUUUUAGCUUUUUUUCUCUUGAAAAAAAAUUCAAAUCCAACUAAAAUUGUAGAAAAUCAGGAGGAAAUCUGAUUUGUCAUUCUCACAUUGAA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |