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BaseInfo

ncRNA ID gra-miR8639g
Species Gossypium raimondii
Class miRNA
Genome position chr2:31172756-31172957 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - UAAACAUAAGUAGAAUUAAACAAG - 34
Stem-loop(if miRNA) G                                                CUUCCAAUAUAUACUAAC   A   UAGUAAUGAAACUGACUUUUAUAUUUAAUCAUUUG
 UAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAACUCUUUUAAG                  CAG UUU                                   A
 ||||||||||||||||||||||||||||||||||||||||||||||||                  ||| |||                                   A
 AUUACCUUCUGAACAAAUUAAGAUGAAUACAAAUUGUUGAGAAAAUUC                  CUG UUU                                   A
-                                                -----------------A   -   AUACUUUCAACAAAAACAGAUUAAAAAAAAUAUAA
Stem-loop sequence GUAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAACUCUUUUAAGCUUCCAAUAUAUACUAACCAGAUUUUAGUAAUGAAACUGACUUUUAUAUUUAAUCAUUUGAAAAAUAUAAAAAAAAUUAGACAAAAACAACUUUCAUAUUUGUCACUUAAAAGAGUUGUUAAACAUAAGUAGAAUUAAACAAGUCUUCCAUUA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).