| ncRNA ID | gra-miR8665 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr2:22248718-22249095 [-] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 11 - UUAAUUAUUAUAUAGAUCAAGGAU - 34 |
| Stem-loop(if miRNA) |
CA A G U - GAU -GUAA U ------------ AAUUAGGAUUAUUUUGUACAGGAAUUUUGGUUAGUUUUGAACCUAGGGCCUAAUUUGAAAUUAUGUAAAAAUUUAGCAUAUUAAUUGUGAAGAAUUCGAAUGGUAAAGGCUGCUUUGGGGUGU AUUG UUAAUUUUUGGU U UAUGA GAUUAAAU GAUUUG UCUUUAU G UU U |||| |||||||||||| | ||||| |||||||| |||||| ||||||| | || UGGC AGUUAGGAACUA A AUAUU UUAAUUUA UUAAAU AAGUUUA U AU A CA A G U A -AG AAGUU - GUAAUAAUUCAA AAAGAUACGUAUACGGGGAAUUUAAAGUAAAAAAUGUUAAAAUGUGAAAUAAGUUAAAUCAGGAAUUGUGGUUUUAUAAAAUUUAAAAGUGAAAAUUGGAGAUUAUGAAGGUUGAUUUAAGUU |
| Stem-loop sequence | CAAUUGAUUAAUUUUUGGUGUUUAUGAGAUUAAAUGAUGAUUUGGUAAUCUUUAUUGUUAAUUAGGAUUAUUUUGUACAGGAAUUUUGGUUAGUUUUGAACCUAGGGCCUAAUUUGAAAUUAUGUAAAAAUUUAGCAUAUUAAUUGUGAAGAAUUCGAAUGGUAAAGGCUGCUUUGGGGUGUUAUUGAAUUUAGUUGGAAGUAUUAGAGGUUAAAAGUGAAAAUUUAAAAUAUUUUGGUGUUAAGGACUAAAUUGAAUAAAGUGUAAAAUUGUAAAAAAUGAAAUUUAAGGGGCAUAUGCAUAGAAAUAAACUUAAUAAUGUAUUUGAAUUGAAUAAAUUGAAUUUAAUUAUUAUAUAGAUCAAGGAUUGAACGGUAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012628550.1 |
|
2.5 | PREDICTED: Gossypium raimondii DELLA protein RGL1-like (LOC105798476), mRNA | DELLA protein RGL1-like(LOC105798476) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |