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BaseInfo

ncRNA ID gra-miR8762c
Species Gossypium raimondii
Class miRNA
Genome position chr2:21452515-21452762 [-]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 215 - UUAACGUUUGUUAACUUUGUUGAU - 238
Stem-loop(if miRNA) -   CG     --         G             --UUUA   C   --A      U --AUA    CCACAUCAAUAAUUAAUUUUUUUAAUUAAAAAAUUAAAAAUUUAUUUAAAAAAAUUGU
 GGA  GAAAA  UUAACGUUU UUAACUUUGUUGA      AUA AUG   AUUGUC C     GAUG                                                          U
 |||  |||||  ||||||||| |||||||||||||      ||| |||   |||||| |     ||||                                                          A
 UCU  UUUUU  AAUUGCAAA AAUUGAAACAAUU      UAU UAC   UAAUAG G     AUUA                                                          A
A   AU     UC         G             CCACUG   A   ACC      U CAAUC    AUUAAUUAAAAUUUUUUUAAUUUUUAUAAAAAAAUAUUAAAAUAUGAAAAAUUGUUAA
Stem-loop sequence GGACGGAAAAUUAACGUUUGUUAACUUUGUUGAUUUAAUACAUGAAUUGUCUCAUAGAUGCCACAUCAAUAAUUAAUUUUUUUAAUUAAAAAAUUAAAAAUUUAUUUAAAAAAAUUGUUAAAAUUGUUAAAAAGUAUAAAAUUAUAAAAAAAUAUUUUUAAUUUUUUUAAAAUUAAUUAAUUACUAACGUGAUAAUCCACAUAUAUGUCACCUUAACAAAGUUAAGAAACGUUAACUUUUUUUAUCUA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).