ncRNA ID | gra-miR8762c |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr2:21452515-21452762 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 215 - UUAACGUUUGUUAACUUUGUUGAU - 238 |
Stem-loop(if miRNA) |
-   CG     --         G             --UUUA   C   --A      U --AUA    CCACAUCAAUAAUUAAUUUUUUUAAUUAAAAAAUUAAAAAUUUAUUUAAAAAAAUUGU  GGA  GAAAA  UUAACGUUU UUAACUUUGUUGA      AUA AUG   AUUGUC C     GAUG                                                          U  |||  |||||  ||||||||| |||||||||||||      ||| |||   |||||| |     ||||                                                          A  UCU  UUUUU  AAUUGCAAA AAUUGAAACAAUU      UAU UAC   UAAUAG G     AUUA                                                          A A   AU     UC         G             CCACUG   A   ACC      U CAAUC    AUUAAUUAAAAUUUUUUUAAUUUUUAUAAAAAAAUAUUAAAAUAUGAAAAAUUGUUAA |
Stem-loop sequence | GGACGGAAAAUUAACGUUUGUUAACUUUGUUGAUUUAAUACAUGAAUUGUCUCAUAGAUGCCACAUCAAUAAUUAAUUUUUUUAAUUAAAAAAUUAAAAAUUUAUUUAAAAAAAUUGUUAAAAUUGUUAAAAAGUAUAAAAUUAUAAAAAAAUAUUUUUAAUUUUUUUAAAAUUAAUUAAUUACUAACGUGAUAAUCCACAUAUAUGUCACCUUAACAAAGUUAAGAAACGUUAACUUUUUUUAUCUA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |