| ncRNA ID | gra-miR7494b |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr2:17985936-17986192 [+] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 23 |
| Mature sequence(if miRNA) | 225 - AGAGGGAGAAGCAGAAGAGAAUA - 247 |
| Stem-loop(if miRNA) |
A UCC A C U AA CC ---------AC CUCGCCUCACUCAAAA CCUUUUUUUUU AUUCUCUUCU UUUC CCCUUUGUUUUCCUCC UUCUUCAUUUCUUUUAAUGUA UUUUCUAUGUUU UAUUUGUUAAAACUAGUCC GAG A ||||||||||| |||||||||| |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||| GGAAAAAAAAA UAAGAGAAGA GAAG GGGAGACAAAAGGAGG AAGGGGUAAAGAAAAUUGCAU AAAAGAUACAAA GUAAACAAUUUUGAUCAGG ACA A - --- C A C CA AA GAUAUGAAAAU AAAACUUGUUAAAUUA |
| Stem-loop sequence | ACCUUUUUUUUUUCCAUUCUCUUCUAUUUCCCCCUUUGUUUUCCUCCUUUCUUCAUUUCUUUUAAUGUAAAUUUUCUAUGUUUCCUAUUUGUUAAAACUAGUCCACGAGCUCGCCUCACUCAAAAAAAUUAAAUUGUUCAAAAACAUAAAAGUAUAGGGACUAGUUUUAACAAAUGAAAAACAUAGAAAAACUACGUUAAAAGAAAUGGGGAACGGAGGAAAACAGAGGGAGAAGCAGAAGAGAAUAAAAAAAAAGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012617146.1 |
|
2.0 | PREDICTED: Gossypium raimondii uncharacterized LOC105789791 (LOC105789791), mRNA | uncharacterized LOC105789791(LOC105789791) | coding protein | psRNATarget | |||||||||
| XM_012584605.1 |
|
2.5 | PREDICTED: Gossypium raimondii ABC transporter C family member 10-like (LOC105765482), mRNA | ABC transporter C family member 10-like(LOC105765482) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |