ncRNA ID | gra-miR8765 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr2:14450236-14450421 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - UUAGUGGAGCUCAUGCUAGAA - 31 |
Stem-loop(if miRNA) |
A       CAC     A                  AA     U             C  A  A         --AUU  UAAAUCCUUAGAAA  UAUGGGG   UUCUA CAUGAGCUUCACUGAAAA  GCUUA GAAAAGCUUUUAC AA AU UCUAACGAU     GG              U  |||||||   ||||| ||||||||||||||||||  ||||| ||||||||||||| || || |||||||||     ||              A  GUACCCU   AAGAU GUACUCGAGGUGAUUUUU  CGAAU UUUUUCGAAAAUG UU UA AGAUUGCUA     UU              U A       -UU     C                  AC     C             A  A  A         AAUGG  AUAACCGAAAUGGU |
Stem-loop sequence | AUAUGGGGCACUUCUAACAUGAGCUUCACUGAAAAAAGCUUAUGAAAAGCUUUUACCAAAAUAUCUAACGAUAUUGGUAAAUCCUUAGAAAUAUUGGUAAAGCCAAUAUUGGUAAAUCGUUAGAAAUAUUAGUAAAAGCUUUUUCUAAGCCAUUUUUAGUGGAGCUCAUGCUAGAAUUUCCCAUGA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |