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BaseInfo

ncRNA ID gra-miR8765
Species Gossypium raimondii
Class miRNA
Genome position chr2:14450236-14450421 [-]
Reference genome Graimondii2_0
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - UUAGUGGAGCUCAUGCUAGAA - 31
Stem-loop(if miRNA) A       CAC     A                  AA     U             C  A  A         --AUU  UAAAUCCUUAGAAA
 UAUGGGG   UUCUA CAUGAGCUUCACUGAAAA  GCUUA GAAAAGCUUUUAC AA AU UCUAACGAU     GG              U
 |||||||   ||||| ||||||||||||||||||  ||||| ||||||||||||| || || |||||||||     ||              A
 GUACCCU   AAGAU GUACUCGAGGUGAUUUUU  CGAAU UUUUUCGAAAAUG UU UA AGAUUGCUA     UU              U
A       -UU     C                  AC     C             A  A  A         AAUGG  AUAACCGAAAUGGU
Stem-loop sequence AUAUGGGGCACUUCUAACAUGAGCUUCACUGAAAAAAGCUUAUGAAAAGCUUUUACCAAAAUAUCUAACGAUAUUGGUAAAUCCUUAGAAAUAUUGGUAAAGCCAAUAUUGGUAAAUCGUUAGAAAUAUUAGUAAAAGCUUUUUCUAAGCCAUUUUUAGUGGAGCUCAUGCUAGAAUUUCCCAUGA

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).