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BaseInfo

ncRNA ID gra-miR8646
Species Gossypium raimondii
Class miRNA
Genome position chr2:7413256-7413357 [-]
Reference genome Graimondii2_0
Source miRBase
Length 21
Mature sequence(if miRNA) 72 - UAGUGAGGAUGGGAAAUUUGU - 92
Stem-loop(if miRNA) -   U     GU          GG        U    C            U
 GUA GGAAA  AGUGAGGAUG  AAAUUUGU GAUC AAAUGAUUGGUU A
 ||| |||||  ||||||||||  |||||||| |||| |||||||||||| G
 CGU CCUUU  UCACUUCUAC  UUUAAACA UUAG UUUACUAAUUAA G
U   -     GC          UU        U    -            A
Stem-loop sequence GUAUGGAAAGUAGUGAGGAUGGGAAAUUUGUUGAUCCAAAUGAUUGGUUUAGGAAAUUAAUCAUUUGAUUUACAAAUUUUUCAUCUUCACUCGUUUCCUGCU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).