ncRNA ID | gra-miR8745 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr13:57000135-57000297 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 133 - UCAACGGAGUUGGGAGACAAA - 153 |
Stem-loop(if miRNA) |
C       GU                   C       C  A   AU  AAAU   ----C  -  UUUCCUUGGUGGCGCAUGG  AGGUCGG  UUUUGUUUCCCGGCUCUGU GAGAGCC GA UUG  GA    GGG     AC CA                   C  |||||||  ||||||||||||||||||| ||||||| || |||  ||    |||     || ||                   C  UCCGGCC  AAAACAGAGGGUUGAGGCA CUCUCGG CU GAC  CU    CCC     CC CG                   C -       UC                   A       A  C   CU  --GU   AAGUA  U  UCCUCGCAGAUCAACCUAG |
Stem-loop sequence | CAGGUCGGGUUUUUGUUUCCCGGCUCUGUCGAGAGCCCGAAUUGAUGAAAAUGGGCACCAUUUCCUUGGUGGCGCAUGGCCCGAUCCAACUAGACGCUCCUGCUCCAUGAACCCUGUCUCCAGCUCAGGCUCUCAACGGAGUUGGGAGACAAAACUCCGGCCU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |