ncRNA ID | gra-miR8638 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr13:56581801-56582022 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 192 - UGAAUACAGGAAUGGCUCUCU - 212 |
Stem-loop(if miRNA) |
- - C U U CC UUUA - UACACGUUGGCCCGUUCAGAUUUAGGUGUUC GU GAGAAUGGUGAAUACAGGAAUGGCU UCUGUGCCAAUCUCGU AAAG GAGGGCUCUACCCUA UCUA C GAC A || ||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||| |||| | ||| CA CUCUUACCACUUAUGUUCUUACCGA AGACGCGGUUGGAGCA UUUC CUCCCGAGAUGGGAU AGAU C AGU G U U U - U -U -UCA C ACUUUUGAAAUCCACUAUCCAAUAGAAAGGU |
Stem-loop sequence | GUGAGAAUGGUGAAUACAGGAAUGGCUCUCUGUGCCAAUCUCGUUAAAGUGAGGGCUCUACCCUACCUCUAUUUACGACUACACGUUGGCCCGUUCAGAUUUAGGUGUUCAGUGGAAAGAUAACCUAUCACCUAAAGUUUUCAUGACCACUUAGAUUAGGGUAGAGCCCUCUCUUUACGAGGUUGGCGCAGAUAGCCAUUCUUGUAUUCACCAUUCUCUACU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |