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BaseInfo

ncRNA ID gra-miR8771c
Species Gossypium raimondii
Class miRNA
Genome position chr13:54359066-54359354 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 256 - UAGGGAGGUAACGAAGCUUAACGG - 279
Stem-loop(if miRNA) U     ----  AAUAAUCAGUCUAUCGUUAAGCUUUGUAAUCUCACUAACGACAAUCCUACCAAUUAGGAUGAGAAUAGUUUUUCCAGUCAAAAUAGAAAAAAAAAAACUAAAAAAAAAAGAGACGAAUGAUUUUUCUUUUUCC
 GUUAC    GA                                                                                                                                     A
 |||||    ||                                                                                                                                     G
 CAAUG    GG                                                                                                                                     U
C     AUAC  CAAUUCGAAGCAAUGGAGGGAUUACCGUUAGAGUGCACCGUCGGCUUUACUCAAAAUUUACGAUUUAACCUACAGGUUGACCUUGCUAUUAUAAAAAAUUAAUUAACUUUUAAAAUUUAAUUAAUGUGUAAUU
Stem-loop sequence UGUUACGAAAUAAUCAGUCUAUCGUUAAGCUUUGUAAUCUCACUAACGACAAUCCUACCAAUUAGGAUGAGAAUAGUUUUUCCAGUCAAAAUAGAAAAAAAAAAACUAAAAAAAAAAGAGACGAAUGAUUUUUCUUUUUCCAGUUUAAUGUGUAAUUAAUUUAAAAUUUUCAAUUAAUUAAAAAAUAUUAUCGUUCCAGUUGGACAUCCAAUUUAGCAUUUAAAACUCAUUUCGGCUGCCACGUGAGAUUGCCAUUAGGGAGGUAACGAAGCUUAACGGCAUAGUAACC

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).