ncRNA ID | gra-miR8776d |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr13:51870292-51870491 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 167 - UUUCAAAGUCCUUGCAUACUAUUU - 190 |
Stem-loop(if miRNA) |
ACA  G   C              A     C   A     C  U  UCACACAAGAUCCAUGCCCAAUGGCACGCUUUAUAUAAUUCGAGCUCGUGGUC    GG GAG AAAUGGUAUGCAAG ACUUU AAA UUUUC UC GC                                                     U    || ||| |||||||||||||| ||||| ||| ||||| || ||    CC CUC UUUAUCAUACGUUC UGAAA UUU AAAAG AG GU                                                     C UGA  A   U              C     C   A     A  U  UACCGAAGUUCGUAAAGCAAAAGGUUUAUUAACCAGCCAGAAAUCAAUAAUUG |
Stem-loop sequence | ACAGGGGAGCAAAUGGUAUGCAAGAACUUUCAAAAUUUUCCUCUGCUCACACAAGAUCCAUGCCCAAUGGCACGCUUUAUAUAAUUCGAGCUCGUGGUCUCGUUAAUAACUAAAGACCGACCAAUUAUUUGGAAAACGAAAUGCUUGAAGCCAUUGUGAAGAAAAAUUUCAAAGUCCUUGCAUACUAUUUUCUCACCAGU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |