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BaseInfo

ncRNA ID gra-miR8776b
Species Gossypium raimondii
Class miRNA
Genome position chr13:51864610-51864809 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 167 - UUUCAAAGUCCUUGCAUACUAUUU - 190
Stem-loop(if miRNA) GGG  GA     -                     A       -A  ----- UCACACAAAAUCUAUGCACACCGACACCCUUCAUCUCAUUCAAGCUAGUU
   GG  GCAAA UAGUAUGUAGGGACUUUGAAA UUUUCUU  UG     C                                                  G
   ||  ||||| ||||||||||||||||||||| |||||||  ||     |                                                  G
   CC  UGUUU AUCAUACGUUCCUGAAACUUU AAAAGAA  GU     A                                                  U
UGA  AC     U                     A       AU  UACCG AGUUCGUAAAACAAAAGAUUUAUUUACCAGCCAAGAACCAAUAACUGCAC
Stem-loop sequence GGGGGGAGCAAAUAGUAUGUAGGGACUUUGAAAAUUUUCUUAUGCUCACACAAAAUCUAUGCACACCGACACCCUUCAUCUCAUUCAAGCUAGUUGGUCACGUCAAUAACCAAGAACCGACCAUUUAUUUAGAAAACAAAAUGCUUGAAGCCAUUGUAAAGAAAAAUUUCAAAGUCCUUGCAUACUAUUUUGUCACCAGU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).