ncRNA ID | gra-miR8776b |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr13:51864610-51864809 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 167 - UUUCAAAGUCCUUGCAUACUAUUU - 190 |
Stem-loop(if miRNA) |
GGG  GA     -                     A       -A  ----- UCACACAAAAUCUAUGCACACCGACACCCUUCAUCUCAUUCAAGCUAGUU    GG  GCAAA UAGUAUGUAGGGACUUUGAAA UUUUCUU  UG     C                                                  G    ||  ||||| ||||||||||||||||||||| |||||||  ||     |                                                  G    CC  UGUUU AUCAUACGUUCCUGAAACUUU AAAAGAA  GU     A                                                  U UGA  AC     U                     A       AU  UACCG AGUUCGUAAAACAAAAGAUUUAUUUACCAGCCAAGAACCAAUAACUGCAC |
Stem-loop sequence | GGGGGGAGCAAAUAGUAUGUAGGGACUUUGAAAAUUUUCUUAUGCUCACACAAAAUCUAUGCACACCGACACCCUUCAUCUCAUUCAAGCUAGUUGGUCACGUCAAUAACCAAGAACCGACCAUUUAUUUAGAAAACAAAAUGCUUGAAGCCAUUGUAAAGAAAAAUUUCAAAGUCCUUGCAUACUAUUUUGUCACCAGU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |