ncRNA ID | gra-miR8776a |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr13:51821770-51821970 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 168 - UUUCAAAGUCCUUGCAUACUAUUU - 191 |
Stem-loop(if miRNA) |
AUGGGG   C         U              A      UAUGC     CAAAA  UAUGCCCACCGACACGCUUCAUCUCAUUCAAGCUACUUGGUCCCG       GAG AAAUAGUAU CAGGGGCUUUGAAA UUUUCU     UCACA     UC                                             U       ||| ||||||||| |||||||||||||| ||||||     |||||     ||       CUC UUUAUCAUA GUUCCUGAAACUUU AAAAGA     AGUGU     CG                                             C UGAGCA   U         C              A      -----     --UAA  AAGUUCGUAAGGCAAAAGGUUUAUUCACCAACCAAGAACCAAUAA |
Stem-loop sequence | AUGGGGGAGCAAAUAGUAUUCAGGGGCUUUGAAAAUUUUCUUAUGCUCACACAAAAUCUAUGCCCACCGACACGCUUCAUCUCAUUCAAGCUACUUGGUCCCGUCAAUAACCAAGAACCAACCACUUAUUUGGAAAACGGAAUGCUUGAAGCAAUUGUGAAGAAAAAUUUCAAAGUCCUUGCAUACUAUUUUCUCACGAGU |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |