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BaseInfo

ncRNA ID gra-miR8776a
Species Gossypium raimondii
Class miRNA
Genome position chr13:51821770-51821970 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 168 - UUUCAAAGUCCUUGCAUACUAUUU - 191
Stem-loop(if miRNA) AUGGGG   C         U              A      UAUGC     CAAAA  UAUGCCCACCGACACGCUUCAUCUCAUUCAAGCUACUUGGUCCCG
      GAG AAAUAGUAU CAGGGGCUUUGAAA UUUUCU     UCACA     UC                                             U
      ||| ||||||||| |||||||||||||| ||||||     |||||     ||
      CUC UUUAUCAUA GUUCCUGAAACUUU AAAAGA     AGUGU     CG                                             C
UGAGCA   U         C              A      -----     --UAA  AAGUUCGUAAGGCAAAAGGUUUAUUCACCAACCAAGAACCAAUAA
Stem-loop sequence AUGGGGGAGCAAAUAGUAUUCAGGGGCUUUGAAAAUUUUCUUAUGCUCACACAAAAUCUAUGCCCACCGACACGCUUCAUCUCAUUCAAGCUACUUGGUCCCGUCAAUAACCAAGAACCAACCACUUAUUUGGAAAACGGAAUGCUUGAAGCAAUUGUGAAGAAAAAUUUCAAAGUCCUUGCAUACUAUUUUCUCACGAGU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).