| ncRNA ID | gra-miR8656 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr13:51813682-51813958 [+] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 11 - UGGAAAAGUGGUAAUAAGGGG - 31 |
| Stem-loop(if miRNA) |
- G A AU AA A AAAAUUUUUGUUAAGCUCACACAAAAUCUAUGCUCACCGACACCCUUCAUCUCAUCCCAGCUACCUG UUGAAGUUGAUGGAAAAGUGGUAAUAAGGGG AUAUUAACAACUAGUGAGAA AUAGU GC GG UUUC G ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || || |||| U AACUUCGGCUACCUUUUCACCAUUAUUCCCC UAUGGUUGUUGAUCACUCUU UAUCG UG AA CUUU C U - C CC -A - AAAAAGAAGAGUUACCGAAGUUCGUAAGACAAACGGUUUAUUCACCAGCGAAGAACCAAUAACUGGU |
| Stem-loop sequence | UUGAAGUUGAUGGAAAAGUGGUAAUAAGGGGGAUAUUAACAACUAGUGAGAAAAUAGUAUGCAAGGAUUUCAAAAUUUUUGUUAAGCUCACACAAAAUCUAUGCUCACCGACACCCUUCAUCUCAUCCCAGCUACCUGGUCUGGUCAAUAACCAAGAAGCGACCACUUAUUUGGCAAACAGAAUGCUUGAAGCCAUUGAGAAGAAAAAUUUCAAAGUCCGCUAUCUUCUCACUAGUUGUUGGUAUCCCCUUAUUACCACUUUUCCAUCGGCUUCAAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012602183.1 |
|
3.0 | PREDICTED: Gossypium raimondii lactosylceramide 4-alpha-galactosyltransferase-like (LOC105778472), mRNA | lactosylceramide 4-alpha-galactosyltransferase-like(LOC105778472) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |