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BaseInfo

ncRNA ID	novel_osa_miR12740
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:36630919-36630994 [-]
Reference genome	IRGSP-1.0
Source	SRR5049785
Length	21
Mature sequence(if miRNA)	1 - ACGGAAGGGGACUCCGGGCGC - 21
Stem-loop(if miRNA)	--     CU   G       --  GUC     UG C  A   GCUUG  GUC CCUUCCG  CC   GCGUG  C GG G   |||||  ||| |||||||  ||   |||||  | || G   CGGGC  CAG GGAAGGC  GG   CGCGC  G CC A CG     CU   G       AA  -AU     GU A  G
Stem-loop sequence	GCUUGCUGUCGCCUUCCGCCGUCGCGUGUGCCGGAGGAGCCAGUGCGCGCUAGGAACGGAAGGGGACUCCGGGCGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288896.1	ncRNA:21   CGCGGGCCUCAGGGGAAGGCA   1   ||||||||||||||||||||* targets:1471   GCGCCCGGAGUCCCCUUCCGC   1491 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090080F20, full insert sequence	NA	coding protein	psRNATarget
XM_015781564.1	ncRNA:21   CGCGGGCCUCAGGGGAAGGCA   1   *||||||||||||||||||*| targets:345   CCGCCCGGAGUCCCCUUCCCU   365 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group trihelix transcription factor GTL1 (LOC4336540), transcript variant X1, mRNA	trihelix transcription factor GTL1(LOC4336540)	coding protein	psRNATarget
XM_015781565.1	ncRNA:21   CGCGGGCCUCAGGGGAAGGCA   1   *||||||||||||||||||*| targets:345   CCGCCCGGAGUCCCCUUCCCU   365 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group trihelix transcription factor GTL1 (LOC4336540), transcript variant X2, mRNA	trihelix transcription factor GTL1(LOC4336540)	coding protein	psRNATarget