ncRNA ID | gra-miR8639e |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr13:11302131-11302332 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - UAAACAUAAGUAGAAUUAAACAAG - 34 |
Stem-loop(if miRNA) |
G                                      C         CUUUCAAUAUAUACUAAC   A   UAGUAAUGAAACUGACUUUUAUAUUUAACAUUUGA  UAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAA UCUUUUAAG                  CAG UUU                                   A  |||||||||||||||||||||||||||||||||||||| |||||||||                  ||| |||                                   A  AUUACCUUCUGAACAAAUUAAGAUGAAUACAAAUUGUU AGAAAAUUC                  CUG UUU                                   A -                                      A         -----------------A   -   AUACUUUCAACAAAAACAGAUUAAAAAAAAAUAUA |
Stem-loop sequence | GUAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAACUCUUUUAAGCUUUCAAUAUAUACUAACCAGAUUUUAGUAAUGAAACUGACUUUUAUAUUUAACAUUUGAAAAAUAUAAAAAAAAAUUAGACAAAAACAACUUUCAUAUUUGUCACUUAAAAGAAUUGUUAAACAUAAGUAGAAUUAAACAAGUCUUCCAUUA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |