ncRNA ID | gra-miR8639d |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr13:11302130-11302331 [+] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 169 - UAAACAUAAGUAGAAUUAAACAAG - 192 |
Stem-loop(if miRNA) |
G                                                 --     --- U  GAAAGUUGUUUUUGUCUAAUUUUUUUUUAUAUUUUUCAA  UAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAAUUCUUUUAAGU  GACAA   A AU                                       A  |||||||||||||||||||||||||||||||||||||||||||||||||  |||||   | ||                                       U  AUUACCUUCUGAACAAAUUAAGAUGAAUACAAAUUGUUGAGAAAAUUCG  AGUUA   A UG                                       G -                                                 AA     UAU -  AUUGGUCUAAAAUCAUUACUUUGACUGAAAAUAUAAAUU |
Stem-loop sequence | GUAAUGGAAGACUUGUUUAAUUCUACUUAUGUUUAACAAUUCUUUUAAGUGACAAAUAUGAAAGUUGUUUUUGUCUAAUUUUUUUUUAUAUUUUUCAAAUGUUAAAUAUAAAAGUCAGUUUCAUUACUAAAAUCUGGUUAGUAUAUAUUGAAAGCUUAAAAGAGUUGUUAAACAUAAGUAGAAUUAAACAAGUCUUCCAUUA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |