| ncRNA ID | gra-miR8764 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | chr12:33216943-33217072 [-] |
| Reference genome | Graimondii2_0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 100 - UUAGAUUGCAUUUUACCCCUU - 120 |
| Stem-loop(if miRNA) |
- GG A A U G CAU CG -UG U AU GUACUAAG UU GAUUGCAUUUU CCCCUUU ACU AAAAA GGGC GUU CUCU UG U |||||||| || ||||||||||| ||||||| ||| ||||| |||| ||| |||| || CAUGAUUC AA CUAACGUAAAA GGGGAAA UGA UUUUU CUCG UAA GGGA AU U A -A - C - A -UU UU UCA U GU |
| Stem-loop sequence | GUACUAAGGGUUAGAUUGCAUUUUACCCCUUUUACUGAAAAACAUGGGCCGGUUUGCUCUUUGAUUUUGUAUAGGGACUAAUUUGCUCUUUUUUUAAGUAAAGGGGCAAAAUGCAAUCAAACUUAGUACA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012625086.1 |
|
1.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105795455 (LOC105795455), mRNA | uncharacterized LOC105795455(LOC105795455) | coding protein | psRNATarget | |||||||||
| XM_012605192.1 |
|
2.0 | PREDICTED: Gossypium raimondii nudix hydrolase 25 (LOC105780712), mRNA | nudix hydrolase 25(LOC105780712) | coding protein | psRNATarget | |||||||||
| XM_012600317.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105777200 (LOC105777200), transcript variant X2, mRNA | uncharacterized LOC105777200(LOC105777200) | coding protein | psRNATarget | |||||||||
| XM_012600316.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105777200 (LOC105777200), transcript variant X1, mRNA | uncharacterized LOC105777200(LOC105777200) | coding protein | psRNATarget |
| 1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |