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BaseInfo

ncRNA ID gra-miR8728
Species Gossypium raimondii
Class miRNA
Genome position chr12:32870670-32870769 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - CGGGCUUGGGCAAAAUUUUAGGCU - 34
Stem-loop(if miRNA) C  G               GC    U             U       AG
 GG UCGGGUCGGGCUUGG  AAAA UUUAGGCUCAUUU UUAGGCC  A
 || |||||||||||||||  |||| ||||||||||||| |||||||
 CC AGUCCGGUCCGAAUU  UUUU AAGUCCGGGUAAA GAUCCGG  C
U  A               GA    U             U       CC
Stem-loop sequence CGGGUCGGGUCGGGCUUGGGCAAAAUUUUAGGCUCAUUUUUUAGGCCAGACCCGGCCUAGUAAAUGGGCCUGAAUUUUUAGUUAAGCCUGGCCUGAACCU

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).