ncRNA ID | gra-miR8730 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | chr12:32606707-32606878 [-] |
Reference genome | Graimondii2_0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 139 - CUAAGAGAUUGGGAUUUGGUAGGA - 162 |
Stem-loop(if miRNA) |
- UG  - G  A       -            U    U  UA    AGAACCUAAUUUAA    UCAAAUUACGACAAACCACUAUCAAAUU  U  AA U AG CUAAGAG AUUGGGAUUUGG AGGA GA  UUGA              CGUA                            A  |  || | || ||||||| |||||||||||| |||| ||  ||||              ||||                            C  A  UU G UC GAUUUUC UGAUUUUAAAUC UCCU UU  AACU              CAGU                            G A GU  A G  -       A            C    U  UA    -----------AAA    AGGAGAGUAAUUUUUCCCUAUUUCUACU |
Stem-loop sequence | UUGAAUGAGACUAAGAGAUUGGGAUUUGGUAGGAUGAUAUUGAAGAACCUAAUUUAACGUAUCAAAUUACGACAAACCACUAUCAAAUUACGUCAUCUUUAUCCCUUUUUAAUGAGAGGAUGACAAAUCAAAUUUUUCCUCCUAAAUUUUAGUACUUUUAGCUGGAUUUGAA |
1 | PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells"; Xue W, Wang Z, Du M, Liu Y, Liu JY; BMC Genomics. 14:629(2013). |