Search result

BaseInfo

ncRNA ID	ath-miR866-5p
Species	Arabidopsis thaliana
Class	miRNA
Genome position	chr5:16157823-16157948 [-]
Reference genome	TAIR10
Source	miRBase
Length	21
Mature sequence(if miRNA)	89 - UCAAGGAACGGAUUUUGUUAA - 109
Stem-loop(if miRNA)	-C   U               A              U             --CC   AAG UCAU  UAU CUUACUUUUCAAGGA CGGAUUUUGUUAAC AAAUGAUUCACAC    UUG   A ||||  ||| ||||||||||||||| |||||||||||||| |||||||||||||    ||| AGUG  AUA GAAUGAGAAGUUUCU GCCUAAAACAAUUG UUUACUAAGUGUG    AGC   A     UU   U               -              C             CUCU   ACA
Stem-loop sequence	UCAUCUAUUCUUACUUUUCAAGGAACGGAUUUUGUUAACUAAAUGAUUCACACCCUUGAAGAAACACGAUCUCGUGUGAAUCAUUUCGUUAACAAAAUCCGUCUUUGAAGAGUAAGUAUAUUGUGA

Reference

1	PMID:17299599 "High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"; Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC; PLoS One. 2:e219(2007).