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BaseInfo

ncRNA ID gra-miR8715
Species Gossypium raimondii
Class miRNA
Genome position chr12:5487096-5487178 [+]
Reference genome Graimondii2_0
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - AUGGGCUGGCACAUGGGCGUGUGG - 34
Stem-loop(if miRNA) UGAA   G           -    UG G      -    GC
    AUU ACAUGGGCUGG CACA  G CGUGUG GCCA  C
    ||| ||||||||||| ||||  | |||||| ||||  C
    UAG UGUGCCCGACC GUGU  U GUACAC CGGU  G
GUCC   G           U    GU G      U    GU
Stem-loop sequence UGAAAUUGACAUGGGCUGGCACAUGGGCGUGUGGCCAGCCCGUGUGGCUCACAUGGUUGUGUGUCCAGCCCGUGUGGAUCCUG

Reference

1 PMID:24044642
"Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells";
Xue W, Wang Z, Du M, Liu Y, Liu JY;
BMC Genomics. 14:629(2013).